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Strains
S. lividans TK24
Peripherome
Exportome
Membranome
Secretome
Sec
TAT
Type VII
S. coelicolor
S. lividans
TK24 vs
S. coelicolor
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S. lividans
TK24 TAT
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S. lividans
TK24 TAT
N
Nucleoid (0)
r
Ribosomal (0)
A
Cytoplasmic (0)
F2
Peripheral inner membrane, facing periplasm (1)
E
Inner membrane lipoproteins (0)
P
Peptidoglycan Binding (4)
X
Extra-cellular (156)
B
Integral inner membrane (0)
F1
Peripheral inner membrane, facing cytoplasm (0)
show distribution
Sub-cellular topologies of Streptomyces lividans TK24 proteins
156
# Proteins
TK24
N
0
A
0
r
0
F1
0
B
0
F2
1
E
0
P
4
Secretory
0
X
156
Accession
(Uniprot)
Entry
Name
(Uniprot) (*)
Gene
Name
(Uniprot) (*)
Gene
ID
(Uniprot) (*)
Protein names
(SToPSdb) (*)
Symbol
Level of
evidence
Existing
Rules
Homologous
Protein
in E.coli K-12 (STEPdb) (*)
Sub-cellular
Location
(STEPdb)
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Lipase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EYG7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
49
Cleavage Score (Cmax):
0.783
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
48
Score:
1.07814
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 48 [AQA-AD]
Score:
0.998
Predict Now
D6EYG7
D6EYG7_STRLI
SLIV_34370
Secreted protein (Tat) - Lipase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Glycosyl hydrolase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EYG4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
48
Cleavage Score (Cmax):
0.337
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
15.6686
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [ALA-GI]
Score:
0.927
Predict Now
D6EYG4
D6EYG4_STRLI
SLIV_34355
Secreted protein (Tat) - Glycosyl hydrolase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - L,D-transpeptidase
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular, Peptidoglycan-associated
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EYE3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.729
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
11.3868
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 32 [AQA-AS]
Score:
0.968
Predict Now
D6EYE3
D6EYE3_STRLI
SLIV_34250
Secreted protein (Tat) - L,D-transpeptidase
X,P
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Protease
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EYC7
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.261
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
11.1767
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 33 [ANA-SQ]
Score:
0.928
Predict Now
D6EYC7
D6EYC7_STRLI
SLIV_34170
Secreted protein (Tat) - Protease
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Beta-galactosidase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EYB3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
24
Cleavage Score (Cmax):
0.603
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
20.2343
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 29 [AWA-AD]
Score:
1
Predict Now
D6EYB3
D6EYB3_STRLI
SLIV_34100
Secreted protein (Tat) - Beta-galactosidase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Tyrosinase (melC2)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EY53
SMART database
SMART: melC2
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
57
Cleavage Score (Cmax):
0.116
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
No signal peptide predicted
Score:
0.995
Predict Now
D6EY53
D6EY53_STRLI
melC2
SLIV_24170
Secreted protein (Tat) - Tyrosinase
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Tyrosinase co-factor
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EY52
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
63
Cleavage Score (Cmax):
0.491
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 62 [AEA-AT]
Score:
0.992
Predict Now
D6EY52
D6EY52_STRLI
SLIV_24165
Secreted protein (Tat) - Tyrosinase co-factor
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EY51
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
30
Cleavage Score (Cmax):
0.555
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
29
Score:
17.0868
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 29 [AAA-AR]
Score:
0.957
Predict Now
D6EY51
D6EY51_STRLI
SLIV_24160
Secreted protein (Tat) - unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EXZ1
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.853
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
35
Score:
13.9604
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 35 [AQA-AT]
Score:
0.992
Predict Now
D6EXZ1
D6EXZ1_STRLI
SLIV_23865
Secreted protein (Tat) - unknown function
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted lipoprotein (TAT) - ABC transporter periplasmic binding domain
Localization:
-
Notes:
Experimentally validated (agarase reporter assay); PMID: 17093047
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EXX3
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
29
Cleavage Score (Cmax):
0.234
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
29
Score:
10.3381
Cleavage Rule:
Pos+2=G
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 33 [GDG-DG]
Score:
0.98
Predict Now
D6EXX3
D6EXX3_STRLI
SLIV_23775
Secreted protein (Tat) - ABC transporter periplasmic binding domain
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Beta-lactamase/transpeptidase-like protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EXE5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
38
Cleavage Score (Cmax):
0.522
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
37
Score:
0.661312
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 37 [AEA-VS]
Score:
0.998
Predict Now
D6EXE5
D6EXE5_STRLI
SLIV_03080
Secreted protein (Tat) - Beta-lactamase/transpeptidase-like protein
X
Potential
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Necrosis inducing protein (IPR008701)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EX40
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.71
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
33
Score:
25.8258
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 33 [AFA-AP]
Score:
0.778
Predict Now
D6EX40
D6EX40_STRLI
SLIV_02575
Secreted protein (Tat) - Necrosis inducing protein (IPR008701)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Alkaline phosphatase D-related protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
By similarity
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EX01
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
58
Cleavage Score (Cmax):
0.465
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 57 [AVA-AP]
Score:
0.998
Predict Now
D6EX01
D6EX01_STRLI
SLIV_33790
Secreted protein (Tat) - Alkaline phosphatase D-related protein
X
By similarity
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Amino acid ABC transporter substrate-binding protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EWM9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
49
Cleavage Score (Cmax):
0.282
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
48
Score:
1.89769
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 48 [ATA-SD]
Score:
0.999
Predict Now
D6EWM9
D6EWM9_STRLI
SLIV_23525
Secreted protein (Tat) - Amino acid ABC transporter substrate-binding protein
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted lipoprotein (TAT) - Glucanase (EC 3.2.1.-)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EWL9
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
42
Cleavage Score (Cmax):
0.505
LipoP 1.0
Prediction:
SpII
Cleavage site amino acid:
30
Score:
24.3459
Cleavage Rule:
Pos+2=S
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 34 [SSS-GD]
Score:
0.974
Predict Now
D6EWL9
D6EWL9_STRLI
SLIV_23465
Secreted protein (Tat) - Glucanase (EC 3.2.1.-)
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - Peptidase M6, InhA family protein
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EWE8
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
33
Cleavage Score (Cmax):
0.756
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
21.8152
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 32 [AQA-DS]
Score:
0.821
Predict Now
D6EWE8
D6EWE8_STRLI
SLIV_23095
Secreted protein (Tat) - Peptidase M6, InhA family protein
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (Sec) - Unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EW55
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
43
Cleavage Score (Cmax):
0.259
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
32
Score:
7.79967
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 42 [AFA-PG]
Score:
0.793
Predict Now
D6EW55
D6EW55_STRLI
SLIV_12690
Secreted protein (Tat) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Integral membrane protein of unknown function
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EVN4
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
36
Cleavage Score (Cmax):
0.29
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 36 [CAA-FD]
Score:
0.972
Predict Now
D6EVN4
D6EVN4_STRLI
SLIV_02010
Secreted protein (Tat) - Unknown function
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Secreted protein (TAT) - AB hydrolase
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Experimental
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EVL5
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
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Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
Yes
Cleavage site amino acid:
41
Cleavage Score (Cmax):
0.626
LipoP 1.0
Prediction:
SpI
Cleavage site amino acid:
40
Score:
11.6511
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
Transmembrane, TMs: 1
Phobius
Signal Peptide:
Yes
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 45 [ARA-AG]
Score:
0.994
Predict Now
D6EVL5
D6EVL5_STRLI
SLIV_01920
Secreted protein (Tat) - AB hydrolase
X
Experimental
SToPS
Manual Curation in SToPs
Comments
UniProt Name:
Putative polyketide beta-ketoacyl synthase 2 (EC 2.3.1.-)
Localization:
-
Notes:
-
Experimentally detected:
-
References:
-
Sub-cellular annotation
Existing rules
:
SToPS
Level of evidence
:
Potential
Predicted sub-cellular location:
Extra-cellular
Prediction Score
:
Protein Family Domains
Pfam domains
PFAM: D6EUH2
SMART database
SMART:
Protein Hydrodynamics
Disorder
Predict Disorder with IUPred tool:
Predict Now
Bioinformatic tools and predictions
SignalP 4.1
Signal Peptide:
No
Cleavage site amino acid:
34
Cleavage Score (Cmax):
0.302
LipoP 1.0
Prediction:
CYT
Cleavage site amino acid:
0
Score:
-0.200913
Cleavage Rule:
-
TMHMM v2.0
Number of TMs:
-
Phobius
Signal Peptide:
No
Number of TMs:
0
PRED-TAT
Localization:
Tat signal peptide predicted. Most likely cleavage site: 1- 39 [AVA-DG]
Score:
0.947
Predict Now
D6EUH2
D6EUH2_STRLI
SLIV_11785
Secreted protein (Tat) - Putative polyketide beta-ketoacyl synthase 2 (EC 2.3.1.-)
X
Potential
SToPS
1
2
3
4
5
6
7
8
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©2017 Copyright KU Leuven and FORTH/ICE-HT. Last Update: January 2019